Publications - Published papers

Please find below publications of our group. Currently, we list 563 papers. Some of the publications are in collaboration with the group of Sonja Prohaska and are also listed in the publication list for her individual group. Access to published papers (access) is restricted to our local network and chosen collaborators. If you have problems accessing electronic information, please let us know:

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<em>Hox</em> cluster duplications in the basal teleost <em>Hiodon alosoides</em> (Osteoglossomorpha)

Karen E. Chambers, Ryan McDaniell, Jeremy F. Raincrow, Maya Deshmukh, Peter F Stadler, Chi-hua Chiu


PREPRINT 08-029:   [ Supplement ]
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Status: Published

Th. Biosci [online first] (2009)


Large-scale -- even genome-wide -- duplications have repeatedly been invoked as an explanation for major radiations. Teleosts, the most species-rich vertebrate clade, underwent a ``fish-specific genome duplication&#039;&#039; (FSGD) that is shared by most ray-finned fish lineages. We investigate here the <em>Hox</em> complement of the goldeye (<em>Hiodon alosoides</em>), a representative of Osteoglossomorpha, the most basal teleostean clade. An extensive PCR survey reveals that goldeye has at least eight \emph{Hox} clusters, indicating a duplicated genome compared to basal actinopterygians. The possession of duplicated <em>Hox</em> clusters is uncoupled to species richness. The <em>Hox</em> system of the goldeye is substantially different from that of other teleost lineages, having retained several duplicates of <em>Hox</em> genes for which crown teleosts have lost at least one copy. A detailed analysis of the PCR fragments as well as full length sequences of two <em>HoxA13</em> paralogs, and <em>HoxA10</em> and <em>HoxC4</em> genes places the duplication event close in time to the divergence of Osteoglossomorpha and crown teleosts. The data are consistent with --- but do not conclusively prove - that Osteoglossomorpha shares the FSGD.


Hox clusters, Fish-Specific Genome Duplication, goldeye (<em>Hiodon alosoides</em>)


doi: 10.1007/s12064-009-0056-1