# STOCKHOLM 1.0 ACTINOPTERYGII A #=GF AU Infernal 1.0.1 #=GC CS 3333434..4322......2234.33326.......62333....35432.........234534343333. #=GC BP +++++++..++++......++++.+++++.......+++++....+++++.........++++++++++++. NC_005451_A_5189_5257_m AAGGCUUUAGCUU.AAUUAAAGUAUCUGGGUUGCAUUCAGAAGAUGUGGGGUAau..auCCUGCAAGUCUUA NC_012576_A_5192_5260_m AAGGCUUUAGCUU.AAUUAAAGUAUCUGGGUUGCAUUCAGAAGAUGUGGGGUAau..auCCUGCAAGUCUUA NC_012646_A_5196_5264_m AAGGCUUUAGCUU.AAUUAAAGUAUCUGGGUUGCAUUCAGAAGAUGUGGGGUAau..auCCUGCAAGUCUUA NC_005795_A_5191_5259_m AAGGCUUUAGCUU.AAUUAAAGUAUCUGGGUUGCAUUCAGAAGAUGUGGGGUAau..auCCUGCAAAUCUUA NC_004743_A_5190_5258_m AAGGCUUUAGCUU.AAUUAAAGUAUCUGGGUUGCAUUCAGAAGAUGUGGGGUAau..auCCCGCAAGUCUUA NC_005252_A_5241_5309_m AAGGCUUUAGCUU.AAUUAAAGUAUCUGGGUUGCAUUCAGAAGAUGUGGGGUAau..auCCUGCAAGUCUUA NC_004420_A_5189_5257_m AAGGCUUUAGCUU.AAUUAAAGUAUCUGGGUUGCAUUCAGAAGAUGUGGGGUAgu..auCCUGCAAGUCUUA NC_004419_A_5184_5252_m AAGGCUUUAGCUU.AAUUAAAGUAUCUGGGUUGCAUUCAGAAGAUGUGGGGUAau..guCCUGCAAGUCUUA NC_005834_A_5189_5257_m AAGGCUUUAGCUU.AAUUAAAGUAUCUGGGUUGCAUUCAGAAGAUGUGGGGUAgu..auCCUGCAAGUCUUA NC_004742_A_5202_5270_m AAGGUUUUAGCUU.AAUUAAAGUGUCUGAGUUGCAUUCAGAAGAUGUGAGAUAga..guCUUGCAAGCCUUA NC_008131_A_5178_5246_m GAGGCUUUAGCUU.AAUUAAAGUGUCUGGGUUGCAUUCAGAAGAUAUGGGAUAga..guCCUGUAAGUCUUA NC_004744_A_5169_5237_m GAGGCUUUAGCUU.AAUUAAAGUGUCUGGGUUGCAUUCAGAAGAUAUGGGAUAaa..guCCUGUAAGUCUUA NC_008104_A_5170_5238_m GAGGCUUUAGCUU.AAUUAAAGUGUCUGGGUUGCAUUCAGAAGAUAUGGGAUAaa..guCCUGUAAGUCUUA NC_005800_A_5186_5254_m GAGGUCUUAGCUU.AAUUAAAGCAUUUGAGUUGCAUUCAAAAAAUGUGGGAUAaa..guCCCGCAGACCUUU NC_005796_A_5185_5253_m AAGGCUUUAGCUU.AAUUAAAGCGUCUGGGUUGCAUUCAGAAAAUGUGGGGUAga..guCCUGCAAGUCUUA NC_006531_A_5177_5245_m AAGGCCUUAGCUU.AAUUAAAGUACCUGGGUUGCAUUCAGGGUAUGUGGGAUAaa..guCCUGCAGGUCUUA NC_006532_A_5176_5244_m AAGGCCUUAGCUU.AAUCAAAGCACCUGGGUUGCAUUCAGGGUAUGUGGGGUAga..guCCUGCAGGUCUUA NC_006533_A_5178_5246_m AAGGCCUUAGCUU.AAUCAAAGCACCUGGGUUGCAUUCAGGGUAUGUGGGGUAga..guCCUGCAGGUCUUA NC_006543_A_5177_5245_m AAGGCCUUAGCUU.AAUUAAAGCAUCUGAGUUGCAUUCAGGAUAUGUGGGAUAaa..guCCUGCAGGUCUUA NC_006534_A_5171_5239_m AAGGCCUUAGCUU.AAUUAAAGCGUCUGAGUUGCAUUCAGGAUAUGUGGGAUAaa..guCCUGCAGGUCUUA NC_006535_A_5171_5239_m AAGGCCUUAGCUU.AAUUAAAGCGUCUGAGUUGCAUUCAGGAUAUGUGGGAUAaa..guCCUGCAGGUCUUA NC_006537_A_5178_5246_m AAGGCCUUAGCUU.AAUUAAAGCAUCUGAGUUGCAUUCAGGAUAUGUGGGAUAaa..guCCUGCAGGUCUUA NC_006538_A_5178_5246_m AAGGCCUUAGCUU.AAUUAAAGCACCUGGGUUGCAUUCAGGUUAUGUGGGAUAaa..guCCUGCAGGUCUUA NC_006539_A_5180_5248_m AAGGCCUUAGCUU.AAUUAAAGCAUCUGAGUUGCAUUCAGGAUAUGUGGGAUAaa..guCCUGCAGGUCUUA NC_002707_A_5170_5238_m AAGGCCUUAGCUU.AAUUAAAGCGUCUGAGUUGCAUUCAGGAUAUGUGGGAUAaa..guCUCGCAGGUCUUA NC_011575_A_5179_5247_m AAGGCCUUAGCUU.AAUUAAAGCAUCUGAGUUGCAUUCAGGAUAUGUGGGAUAaa..guCCUGCAGGUCUUA NC_006536_A_5176_5244_m AAGGCCUUAGCUU.AAUUAAAGCACCUGGGUUGCAUUCAGGGUAUGUGGGAUAga..guCCUGCAGGUCUUA NC_006540_A_5176_5244_m AAGGCCUUAGCUU.AAUUAAAGCAUCUGAGUUGCAUUCAGGAUAUGUGGGAUAaa..guCCUGCAGGUCUUA NC_006541_A_5176_5244_m AAGGCCUUAGCUU.AAUUAAAGCAUCUGAGUUGCAUUCAGGAUAUGUGGGAUAaa..auCCUGCAGGUCUUA NC_006542_A_5181_5249_m AAGGCCUUAGCUU.AAUUAAAGCACCUGAGUUGCAUUUAGGUUAUGUGGGAUAaa..gcCCUGCAGGUCUUA NC_006544_A_5177_5245_m AAGGCCUUAGCUU.AAUUAAAGCAUCUGAGUUGCAUUCAGGAUAUGUGGGAUAaa..guCCUGCAGGUCUUA NC_006545_A_5176_5244_m AAGGCCUUAGCUU.AAUUAAAGCAUCUGAGUUGCAUUCAGGAUAUGUGGGAUAga..guCCUGCAGGUCUUA NC_006546_A_5180_5248_m AAGGCCUUAGCUU.AAUUAAAGCGUCUGAGUUGCAUUCAGGAUAUGUGGGAUAaa..guCCUGCAGGUCUUA NC_006547_A_5175_5243_m AAGGCCUUAGCUU.AAGUAAAGCACCUGGGUUGCAUUCAGGGUAUGUGGGAUAaa..guCCUGCAGGUCUUA NC_013435_A_5180_5248_m AAGGCCUUAGCUU.AAUUAAAGCAUCUGAGUUGCAUUCAGGAUAUGUGGGAUAaa..guCCUGCAGGUCUUA NC_013607_A_5172_5240_m GAGGCCUUAGCUU.AAUUAAAGCGUUUGAGUUGCAUUCAGAAUAUGUGAGAUAga..guCUUGCAGGCCUUA NC_013633_A_5156_5224_m AAGGCCUUAGCUU.AAUUAAAGCGUUUGAGUUGCAUUCAGAAUAUGUGAGAUAga..guCUUGCAGGUCUUA NC_013618_A_5163_5231_m AAGGCUUUAGCUU.AAUUAAAGCGUCUGGGUUGCAUUCAGAAUAUGUGGGAUAga..guCCUGCAGGCCUUA NC_013606_A_5155_5223_m AAGGCCUUAGCUU.AAUUAAAGCGUCUGGGUUGCAUUCAGAAUAUGUGGGAUAga..guCCUGCAGGCCUUA NC_013632_A_5189_5257_m AAGGCCUUAGUUU.AAUUAAACCACCUGGGUUGCAUUCAGGUAAUGUAGGUUAaa..ucCCUGCAGGUCUUA NC_002761_A_5165_5233_m AAGGCCUUAGCUU.AAUUAAAGCUUUUGAUUUGCAUUCAAACUAUGUGGGGUAaa..aaCCCGCAGGCCUUA NC_013629_A_5180_5248_m AAGGCUUUAGCUU.AAUUAAAGCGUCUGGGUUGCAUUCAGAAUAUGUGGGAUAga..guCCUGCAAGUCUUA NC_013630_A_5199_5267_m AAGGCUUUAGCUU.AAUUAAAGCGUCUGGGUUGCAUUCAGAAUAUGUGGGAUAga..guCCUGCAAGUCUUA NC_013611_A_5202_5270_m AAGGCCUUAGCUU.AAAUAAAGUGUCUGUUUUGCAUUCAGAGUAUGUGGGUUAaa..guCUUGCAGGUCUUA NC_013608_A_5155_5223_m AAGGCCUUAGCUU.AAUUAAAGCGUCUGGGUUGCAUUCAGAAUAUGUGGGAUAga..guCCUGCAGGUCUUA NC_005299_A_10381_10449_m AAGGCUUUAUCUU.AAUUAAAGUUUCUGAGUUGCAUUCAGAUUAUGUGAGAUAaa..guCUUGCAGGUCUUA NC_013601_A_5145_5213_m AAGGCCUUAGCUU.AAUUAAAGCAUUUGAUUUGCAUUCAGGUUAUGUGGGAUAaa..guCCUGCAGGUCUUA NC_013612_A_8961_9029_p AAGGACUUAACUU.AAUUAAAGUACCUGACCUGCACUCAGGAAAUGUAAGAUAga..auCUUGCAGACCUUA NC_013622_A_5156_5224_m AAGGCCUUAUCUU.AAUUAAAGUAUUUGAGUUGCAUUUAAAUGAUGUGGGAUAaa..gaCCCGCAGGUCUUA NC_013602_A_5168_5236_m AAGGCCUUAUCUU.AAUUAAAGUGUUUGAGUUGCAUUUAAAUGAUGUGGGAUAga..ggCCCACAGGCCUUA NC_013617_A_5192_5260_m AAGGCCUUAGCUU.AAUUAAAGUACCUGAUUUGCAUUCAGGUUAUGUUGGAUAga..guCCUGCAGGUCUUA NC_013614_A_5180_5248_m AAGGCUUUAACUU.AAUUAAAGUGUCUGAUUUGCAUUCAGGUUAUGUUGGAUAga..guCCUGCAGGUCUUA NC_013613_A_5117_5185_m AAGGCCUUAGCUU.AAUCAAAGCGUUUGAGUUGCAUUCAAUUAAUGUGGGAUAaa..gcCCCGCAGGUCUUA NC_004417_A_5123_5191_m AAGGCCUUAGCUU.AAUUAAAGCGUCUGAUUUGCAUUCAGUUAAUGUGGGAUAga..gcCCCGCAGGUCUUA NC_013610_A_5120_5188_m AAGGCCUUAGCUU.AAUUAAAGCGUUUGAUUUGCAUUCAACUAAUGUGGGUUAau..guCCCGCAGGUCUUA NC_013631_A_5158_5226_m AAGGCCUUAGCUU.AAUUAAAGCGUUUGAGUUGCAUUCAUUUUAUGUGGGAUAaa..auCCUGCAGGUCUUA NC_013624_A_5176_5244_m GAGGCCUUAGCUU.AAUUAAAGUGUCUGAGUUGCAUUCAGUUGAUGCGGGAUAga..acCCUGCAGGUCUUA NC_013626_A_5179_5247_m GAGGCCUUAGCUU.AAUUAAAGUGUCUGAGUUGCAUUCAGUUGAUGCGGGAUAga..gcCCUGCAGGUCUUA NC_013620_A_5143_5211_m GAGGCCUUAGCUU.AUUUAAAGUGUUUGAUUUGCAUUCAUCUGAUGCGAGGUAga..guCUCGCAGGCCUUA NC_013621_A_5166_5234_m AAGGCCUUAGCUU.AAUUAAAGCGUCUGGGUUGCAUUCAGAAUAUGUGGGAUAga..guCCUGCAGGUCUUA NC_013623_A_5171_5239_m AAGGCUUUAGCUU.AAUUAAAGCGUCUGGGUUGCAUUCAGAAUAUGUGGGAUAga..guCCUGCAGGUCUUA NC_013615_A_5309_5377_m AAGGCCUUAGCUU.AAUUAAAGCGUCUGGGUUGCAUUCAGAAUAUGUGGGAUAga..guCCUGCAGGUCUUA NC_013625_A_5166_5234_m AAGGCUUUAGCUU.AAUUAAAGCGUCUGGGUUGCAUUCAGAAUAUGUGGGAUAaa..guCCUGCAGGUCUUA NC_013635_A_5189_5257_m AAGGCCUUAGCUU.AAUUAAAGUGUUUGGUUUGCAUCCAUAUGAUGUGGAAUAga..guUCCGCAGGUCUUA NC_005802_A_5187_5255_m AAGGCCUUAGCUU.AAUUAAAGCGUCUGGUUUGCAUCCAUAUUAUGUGGGAUAaa..guCCUGCAGGCCUUA NC_005298_A_11596_11664_m AAGAUCUUAUCUU.AAUUAAAGUAUCUGGGUUGCAUUCAGAUUAUGCAAGAUAaa..guCUUGCAGGUCUUA NC_013627_A_5233_5301_m AAGGCCUUAGCUU.AAUUAAAGUAUCUGAGUUGCAUUCAGGUUAUGUGGGAUAaa..guCCUGCAGGUCUUA NC_013436_A_5161_5229_m AAGGCCUUAGCUU.AAUUAAAGUAUCUGAGUUGCAUUCAGGUUAUGUGGGAUAaa..guCCUGCAGGUCUUA NC_013628_A_5639_5707_m AAGGCCUUAGCUU.AACUAAAGUAUCUGAGUUGCAUUCAGGUUAUGUGGGAUAaa..gcCCUGCAGGUCUUA NC_013634_A_5195_5263_m AAGGCCUUAGCUU.AAUUAAAGUGUCUGGGUUGCAUUCAGAAUAUGUGGGAUAga..guCCUGCAGGCCUUA NC_013605_A_5184_5252_m AAGGCUUUAGCUU.AAUUAAAGCGUCUGGGUUGCAUUCAGAAUAUGUGGGAUAga..guCCUGCAGGCCUUA NC_005805_A_5197_5265_m AAGGCCUUAGCUU.AAUUAAAGUGUCUGGGUUGCAUUCAGAAUAUGUGGGAUAga..guCCUGCAGGCCUUA NC_006913_A_5146_5214_m AGGGCUUUAGCUU.AAUUAAAGUGUCUGGUUUGCAUCCAGAAGAUGUGGGCUAau..auCCCGCAAGUCUUA NC_009575_A_5165_5233_m AAGGCUUUAGCUU.AAUUAAAGUGUCUGGGUUGCAUUCAGAAGAUGUGGGAUAaa..ucCCUGCAAGUCUUA NC_009576_A_5164_5232_m AAGGCUUUAGCUU.AAUUAAAGUGUCUGGGUUGCAUCCAGAAGAUGUGGGAUAaa..ucCCUGCAAGUCUUA NC_009577_A_5162_5230_m AAGGCCUUAGCUU.AAUUAAAGCGUCUGGGUUGCAUCCAGAAGCUGUGGGGUAaa..guCCCGCAGGCCUUA NC_009578_A_5163_5231_m AAGGCCUUAGCUU.AAUUAAAGCGUCUGGGUUGCAUCCAGAAGCUGUGGGGUAaa..guCCCGCAGGCCUUA NC_008107_A_5166_5234_m AAGGCUUUAGCUU.AAUUAAAGUGUCUGGGUUGCAUUCAGAAGAUGUGGGAUAaa..guCCUGCAAGUCUUA NC_009580_A_5163_5231_m AAGGCUUUAGCUU.AAUUAAAGUGUCUGGGUUGCAUUCAGAAGAUGUGGGAUAaa..guCCUGCAAGUCUUA NC_009583_A_5173_5241_m AAGGCUUUAGCUU.AAUUAAAGUGCCUGGGUUGCAUCCAGGAGCUGUGGGAUAgu..ccCCCGCAAGUCUUA NC_009582_A_5167_5235_m AAGGCUUUAGCUU.AAUUAAAGUGUCUGGGUUGCAUCCAGAAGAUGUGGGAUAaa..auCCUGCAAGUCUUA NC_009586_A_5163_5231_m AAGGCUUUAGCUU.AAUUAAAGUGUCUGGGUUGCAUUCAGAAGAUGUGAGAUAaa..auCUUGCAAGUCUUA NC_009590_A_5168_5236_m AAGGCUUUAGCUU.AAUUAAAGUGUCUGGGUUGCAUUCAGAAGAUGUGGGAUAaa..auCCUGCAAGUCUUA NC_009591_A_5170_5238_m AAGGCUUUAGCUU.AAUUAAAGUGUCUGGGUUGCAUUCAGAAGAUGUGGGAUAaa..auCCUGCAAGUCUUA NC_009592_A_5171_5239_m AAGGCUUUAGCUU.AAUCAAAGUAUCUGGGUUGCAUCCAGAAGAUGUGGGAUAaa..cuCCCGCAAGCCUUA NC_009587_A_5167_5235_m AAGGCUUUAGCUU.AAUUAAAGUGUCUGGGUUGCAUUCAGAAGAUGUGGGAUAaa..auCCUGCAAGUCUUA NC_002616_A_5174_5242_m AAGGCUUUAGCUU.AAUUAAAGUGUCUGGGUUGCAUUCAGAAGAUGUGGGAUAaa..guCCUGCAAGUCUUA NC_006917_A_5137_5205_m AAGGCCUUAGCUU.AAUUAAAGUCCCUGAGUUGCAUUCAGGAGAUGUGGGAUAaa..guCCCGCAGGUCUUA NC_009588_A_5149_5217_m AAGGCUUUAGCUU.AAUUAAAGUGUCUGGGUUGCAUCCAGAAGAUGUGGGAUAaa..ccCCUGCAAGCCUUA NC_009589_A_5158_5226_m AAGGCUUUAGCUU.AAUCAAAGUGUCUGGGUUGCAUCCAGAAGAUGUGGGAUAaa..guCCCGCAAGCCUUA NC_009593_A_5164_5232_m AAGGCCUUAGCUU.AAUUAAAGCAUCUGGGUUGCAUUCAGAAGCUGUGGGGUAaa..guCCCGCAGGCCUUA NC_007889_A_5141_5209_m AAGGCUUUAGCUU.AAUUAAAGUGUCUGGGUUGCAUUCAGAAGAUGUGAGAUAaa..guCUUGCAAGUCUUA NC_009579_A_5164_5232_m AAGGCUUUAGCUU.AAUAAAAGUGUCUGAGUUGCAUUCAGGUGAUGUGGGAUAaa..auCCUGCAAGUCUUA NC_009581_A_5168_5236_m AAGGCUUUAGCUU.AAUUAAAGUGCCUGAGUUGCAUUCAGGUGAUGUGGGAUAaa..auCCCGCAAGUCUUA NC_003097_A_5169_5237_m AAGGCUUUAGCUU.AAUUAAAGUGCCUGAGUUGCAUUCAGGUGAUGUGGGAUAaa..auCCCGCAAGUCUUA NC_009584_A_5165_5233_m GAGGCUUUAGCUU.AAUUAAAGUGUCUGGGUUGCAUCCAGGAGUUGUAGGAUAaa..cuCCUGCAAGCCUUA NC_009585_A_5180_5248_m AAGGCUUUAGCUU.AAUUAAAGUGCCUGGGUUGCAUUCAGGAGUUGUGGGAUAaa..ccCCUGCAAGCCUUA NC_006919_A_5141_5209_m AAGGCUUUAGCUU.AAUUAAAGUGUCUGGGUUGCAUUCAGAAGAUGUGGGAUAaa..guCCUGCAAGUCUUA NC_005798_A_5189_5257_m AAGGCUUUAGCUU.AAUUAAAGUGUCUGGGUUGCAUUCAGAAGAUGUGGGAUAaa..guCCCGCAGGUCUUA NC_005803_A_5190_5258_m AAGGCUUUAGCUU.AAUUAAAGUGUCUGGGUUGCAUUCAGAAGAUGUGGGAUAaa..guCCCGCAGGUCUUA NC_005804_A_5184_5252_m AAGACUUUAGCUU.AAUUAAAGUGUCUGGGUUGCAUUCAGGAGAUGUGGGGUAga..guCCUGCAAGUCUUA NC_005799_A_5183_5251_m AAGACUUUAGCUU.AAUUAAAGUGUCUGGGUUGCAUUCAGGAGAUGUGGGGUAga..guCCCGCAGGUCUUA NC_004593_A_5127_5195_m AAGGCUUUAGCUU.AAUUAAAGUGUCUGGGUUGCAUUCAGAAGAUGUGGGAUAga..guCCUGCAGGUCUUA NC_004592_A_5122_5190_m AAGGCUUUAGCUU.AAAUAAAGUGUCUGGGUUGCAUUCAGAAGAUGUGGGAUCaa..cuCCUGCAAGUUUUA NC_008128_A_5149_5217_m AAGGCUUUAGCUU.AAUUAAAGUGUCUGUUUUGCAUAUAGAAGAUGUGGGAUAaa..guCCCGCAAGUCUUA NC_004391_A_5144_5212_m AAGGCUUUAGCUU.AAUUAAAGUGUCUGUUUUGCAUACAGAAGAUGUGGGAUAaa..guCCUGCAAGUCUUA NC_004393_A_5168_5236_m AAGGCUUUAGCUU.AAUUAAAGUGUCUGUUUUGCAUAUAGAAGAUGUGGGAUAaa..guCCUGCAAGUCUUA NC_003188_A_5169_5237_m AAGGCUUUAGCUU.AAUUAAAGUGUCUGUUUUGCAUAUAGAAGAUGUGGGAUAaa..guCCUGCAAGUCUUA NC_008126_A_5625_5693_m AAGGCCUUAGCUU.AAUUAAAGUGCUUGUCUUGCACACACGAGAUGUGGGAUAga..guCCUGCAGGUCUUA NC_008127_A_5176_5244_m AAGGCCUUAGCUU.AAUUAAAGUGCUUGUUUUGCACACACGAGAUGUGGGAUAga..guCCUGCAGGUCUUA NC_003189_A_5166_5234_m 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AAGGCCUUAGUUU.AAUAAAAACAUUUGAUUUGCAAUCAGAAAAUGCAAGAUAga..cuCUUGUAGGUCUUA NC_008108_A_5170_5238_m AAGGCCUUAGUUU.AAUAAAAACAUUUGAUUUGCAAUCAGAAAAUGCAAGAUAga..guCUUGUAGGUCUUA NC_007783_A_5178_5246_m AAGGCCUUAGUUU.AAUAAAAACAUUUGAUUUGCAAUUAGAAAAUGCAAGAUAaa..cuCUUGUAGGUCUUA NC_010288_A_5176_5244_m AAGGCCUUAGUUU.AAUAAAAACAUUUGAUUUGCAAUUAGAAAAUGCAAGAUAga..cuCUUGUAGGUCUUA NC_013616_A_5179_5247_m AAGGCCUUAGUUU.AAUAAAAACAUUUGAUUUGCAAUCAGAAAAUGCAAGAUAga..cuCUUGUAGGUCUUA NC_008643_A_5165_5233_m AAGGCCUUAGUUU.AACAAAAACAUUUGAUUUGCAUUCAGAAGAUGCAAGAUAaa..cuCUUGUAGGUCUUA NC_008103_A_5165_5233_m AAGGCCUUAGUUU.AACAAAGACAUUUGAUUUGCAUUCAGAAGAUGCGAGAUAaa..cuCUCGUAGGUCUUA NC_002333_A_6109_6176_m AGGGCUUUAGUUU.AAUUAAAAUAUCUGAUUUGCAUUUAGAAGAUGCGGAGUAa...cgUCUGUAAGUCCUA NC_011208_A_5176_5244_m AAGGCCUUAGUUU.AAUAAAAACAUUUGAUUUGCAAUCAGAAAAUGCAAGAUAga..cuCUUGUAGGUCUUA NC_008660_A_5136_5204_m AGGGCUUUAGUUU.AGUUAAAAUAUCUGGCUUGCACUCAGAAGAUGCGGAUUAgu..ugUCCGUAGGUCCUA NC_008105_A_5177_5245_m AAGGCCUUAGUUU.AACAAAAACAUUUGAUUUGCAAUUAGAAAAUGCAAGAUAga..cuCUUGUAGGUCUUA NC_008649_A_5171_5239_m AAGGCCUUAGUUU.AGUAAAAACAUUUGAUUUGCAAUCAGAAAAUGCAAGAUAga..cuCUUGUAGGUCUUA NC_008662_A_5180_5248_m AAGGCCUUAGUUU.AAUAAAAACAUUUGAUUUGCAAUCAGAAAAUGCAAGAUAga..cuCUUGUAGGCCUUA NC_008661_A_5166_5234_m AAGGCCUUAGCUU.AAUAAAAGUGUCUGAUUUGCAAUCAGUCGAUGCAAGUUAau..ccCUUGUAGGCCUUA NC_008644_A_5177_5245_m AAGGCCUUAGUUU.AAUAAAAACAUUUGAUUUGCAAUUAAAAAAUGCAAGAUAga..guCUUGUAGGUCUUA NC_007785_A_5178_5246_m AAGGCCUUAGUUU.AAUAAAAACAUUUGAUUUGCAAUUAAAAAAUGCAAGAUAga..guCUUGUAGGUCUUA NC_007784_A_5176_5244_m AAGGCCUUAGUUU.AAUAAAAACAUUUGAUUUGCAAUUAGAAAAUGCAAGAUAga..guCUUGUAGGUCUUA NC_007786_A_5177_5245_m AAGGCCUUAGUUU.AACAAAAACAUUUGAUUUGCAAUCAGAAAAUGCAAGAUAga..guCUUGUAGGUCUUA NC_010156_A_5179_5247_m AAGGCCUUAGUUU.AAUAAAAACAUUUGAUUUGCAAUUAGAAAAUGCAAGAUAga..cuCUUGUAGGUCUUA NC_010194_A_5177_5245_m AAGGCCUUAGUUU.AAUAAAAACAUUUGAUUUGCAAUCAGAAAAUGCAAGAUAga..cuCUUGUAGGUCUUA NC_008667_A_5181_5249_m AAGGCCUUAGUUU.AAUGAAAACAUUUGAUUUGCAAUCAGAAAAUGCAAGAUAga..cuCUUGUAGGUCUUA NC_008656_A_5169_5238_m AGGGCCUUAGUUU.AAUAAAAACACUUGAUUUGCAGUCAGGAGAUGUAAGUUGau.uuaCUUGUAGGUCUUA NC_008657_A_5168_5236_m AAGGCCUUAGUUU.AAUAAAAACAUCUGAUUUGCAGUCAGAAAAUGCGAGUUAau..cuCUUGUAGGCCUUA NC_010341_A_6118_6186_m AAGGCCUUAGUUU.AAUAAAAACAUUUGAUUUGCAAUCAGAAAAUGCAAGAUAga..cuCUUGUAGGUCUUA NC_011141_A_5178_5246_m AAGGCCUUAGUUU.AAUAAAAACAUUUGAUUUGCAAUCAGAAAAUGCAAGAUAga..cuCUUGUAGGCCUUA NC_008646_A_5173_5241_m AAGGCCUUAGUUU.AAUAAAAACAUUUGAUUUGCAAUUAGAAAAUGCAAGAUAaa..cuCUUGUAGGUCUUA NC_008110_A_5166_5234_m AAGGCCUUAGUUU.AACAAAAACAUUUGAUUUGCAUUCAGAAGAUGCAAGAUAaa..cuCUUGUAGGUCUUA NC_008744_A_5183_5251_m AAGGCCUUAGUUU.AACAAAAACAUUUGAUUUGCAAUCAGAAAAUGCAAGAUAga..cuCUUGUAGGUCUUA NC_008652_A_5185_5253_m AAGGCCUUAGUUU.AACAAAAACAUUUGAUUUGCAAUCAGAAAAUGCAAGAUAga..cuCUUGUAGGUCUUA NC_008663_A_5178_5246_m AAGGCCUUAGUUU.AAUAAAAACAUUUGAUUUGCAAUUAGAAAAUGCAAGAUAga..cuCUUGUAGGUCUUA NC_008112_A_5163_5231_m AAGGCCUUAGUUU.AACAAAAACAUCUGAUUUGCAUUUAGACGAUGCAAGAUAaa..guCUUGUAGGUCUUA NC_008684_A_5171_5239_m AAGGCCUUAGUUU.AACAAAAACAUUUGAUUUGCAAUUAGAAAAUGCAAGAUAga..guCUUGUAGGUCUUA NC_011192_A_5168_5236_m AAGGCCUUAGCUU.AAUAAAAGUGUCUGAUUUGCAAUCAGGAGAUGCAAGUUAau..ucCUUGUAGGCCUUA NC_008681_A_5170_5238_m AAGGCCUUAGUUU.AACAAAAACAUUUGAUUUGCAAUCAGAAAAUGCAAGAUAga..guCUUGUAGGUCUUA NC_011161_A_9790_9858_m AAGGCCUUAGUUU.AACAAAAACAUUUGAUUUGCAAUUAGAAAAUGCAAGAUAaa..cuCUUGUAGGUCUUA NC_008665_A_5169_5237_m AAGGCCUUAGUUU.AAUAAAAACAUUUGAUUUGCAAUUAGAAAAUGCAAGAUAga..cuCUUGUAGGUCUUA NC_011210_A_5176_5244_m AAGGUCUUAGUUU.AAACAAAACAUCUGGUUUGCAACUAGACAAUGCGAGUUAgu..auCUCGUAGAUCUUA NC_008664_A_5171_5239_m AAGGCCUUAGUUU.AAUAAAAACAUUUGAUUUGCAAUUAGAAAAUGCAAGAUAga..cuCUUGUAGGCCUUA NC_010110_A_5172_5240_m AAAGCCUUAGCUU.AAUAAAAGUAUCUGGUUUGCAUUCAGGAGAUGUGAGUUAgu..guCUCACAGGUUUUA NC_008658_A_5174_5242_m AGGGCCUUAGCUU.AAUAAAAGCACCUGAUUUGCAGUCAGGAGAUGUGGGUUAau..auCUUGCAGGUCCUA NC_011211_A_5172_5240_m GAGGCCUUAGUUU.AAUAAAAACAUUUGAUUUGCACUCAUAAAAUGCAAGAUAga..guCUUGUAGGCCUUA NC_008642_A_5166_5234_m GAGGCCUUAGUUU.AAUAAAAACAUUUGAUUUGCACUCAUAAAAUGCAAGAUAga..guCUUGUAGGUCUUA NC_013709_A_5163_5231_m GAGGCCUUAGUUU.AAUAAAAACAUUUGAUUUGCACUCAUAAAAUGCAAGAUAga..guCUUGUAGGUCUUA NC_007885_A_5156_5224_m GAGGCCUUAGUUU.AAUAAAAACAUUUGAUUUGCAUUCAUAAAAUGCAAGAUAga..guCUUGUAGGUCUUA NC_004694_A_5173_5241_m AAGGCCUUAGUUU.AAUUAAAACAUUUGAUUUGCAAUUAAAAAAUGCAAGAUAga..cuCUUGUAGGUCUUA NC_013186_A_6096_6164_m AGGGCCUUAGCUU.AAUGAAAGUGUCUGGUUUGCAGUCAGGAGAUGCGAGUUAgu..uuCUUGUAGGUCUUA NC_013189_A_6092_6160_m AAGGCCUUAGCUU.AAUAAAAGCGCCUGGUUUGCAGUCAGGAGAUGCGAGUUAgu..uuCUUGUAGGUCUUA NC_008648_A_5176_5244_m AAGGCCUUAGUUU.AAUUAAAACAUUUGAUUUGCAAUUAGAAAAUGCAAGAUAga..cuCUUGUAGGUCUUA NC_008651_A_5170_5238_m AAGGCCUUAGUUU.AACAAAAACAUUUGAUUUGCAAUUAGAAAAUGCAAGAUAga..guCUUGUAGGUCUUA NC_008682_A_5187_5255_m AAGGCCUUAGUUU.AAUAAAAACAUUUGAUUUGCAAUUAGAAAAUGCAAGAUAga..cuCUUGUAGGUCUUA NC_013072_A_5188_5256_m AAGGCCUUAGUUU.AAUAAAAACAUUUGAUUUGCAAUUAGAAAAUGCAAGAUAaa..cuCUUGUAGGUCUUA NC_008653_A_5182_5250_m AAGGCCUUAGUUU.AACAAAAACAUUUGAUUUGCAAUUAGAAAAUGCAAGAUAga..cuCUUGUAGGUCUUA NC_008672_A_5167_5235_m AAGGCUUUAGCUU.AAUUAAAGUGUCUGAUUUGCAUUUAGAAGAUGUGGGAUAaa..guCCCGCAAGUCUUA NC_004693_A_5200_5268_m AAGGCUUUAGCUU.AAUUAAAGUGUCUGGGUUGCAUUCAGAAGAUGUGGGAUAaa..guCCCGCAGGCCUUA NC_011018_A_5187_5255_m AAGGCCUUAGCUU.AAUUAAAGUCUUUGAUUUGCAUUCAAAAGAUGUGGGAUAaa..guCCCGCAGGCCUUA NC_004702_A_5187_5255_m AAGGCCUUAGCUU.AAUUAAAGUGUUUGAUUUGCAUUCAGAAGAUGUGGGAUAga..guCCCGCAGGCCUUA NC_007881_A_5162_5230_m AAGGCUUUAUCUU.AAUUAAAGUGUCUGGGUUGCAUUCAGAAGAUGUGGGGUAga..guCCCGCAAGUCUUA NC_007890_A_5152_5220_m AAGGCUUUAGCUU.AAUUAAAGUGUCUGGGUUGCAUUCAGAAGAUGUGGGGUAga..guCCUGCAGGCCUUA NC_007882_A_5162_5230_m AAGGCUUUAGCUU.AAUUAAAGUGUCUGGGUUGCAUUCAGAAGAUGUGGGGUAga..guCCUGCAAGUCUUA NC_007891_A_5156_5224_m AAGGCUUUAGCUU.AAUUAAAGUGUCUGGGUUGCAUUCAGAAGAUGUGGGGUAga..guCCUGCAAGUCUUA NC_007892_A_5179_5247_m AAGGCCUUAGCUU.AAUUAAAGUGUUUGAGUUGCAUUCAGAAGAUGUUGGAUAaa..auCCUGCAGGUCUUA NC_004692_A_5146_5214_m GAGGCUUUAGCUU.AAUUAAAGUGUCUGAGUUGCAUUCAGAAGAUGUGGGAUAga..guCCCGUAAGUCUUA NC_004701_A_5151_5219_m AAGGCUUUAGCUU.AAUUAAAGUGUCUGGGUUGCAUUCAGAAGAUGUGGGAUAaa..guCCUGCAAGUCUUA NC_008232_A_5143_5211_m AAGGCUUUAGCUU.AAUUAAAGUGUCUGAGUUGCAUUCAGAAGAUGUGGGAUAga..guCCUGCAAGCCUUA NC_004697_A_5159_5227_m AAGGCUUUAGCUU.AAUUAAAGUGUCUGAGUUGCAUUCAGAAGAUGUGGGAUAga..guCCCGCAAGCCUUA NC_004698_A_5138_5206_m AAGGCUUUAGCUU.AAUUAAAGUGUCUGGGUUGCAUUCAGAAGAUGUGGGAUAaa..guCCUGCAAGUCUUA NC_008280_A_5168_5236_m AAGGCUUUAGCUU.AAUUAAAGUGUCUGAGUUGCAUUCAGAAGCUGUAGGAUAga..guCUUGCAAGUCUUA NC_003489_A_6021_6089_m AAGGCUUUAGCUU.AAUUAAAGUGUCUGGGUUGCAUUCAGAAGAUGUGAGAUAaa..guCUUGCAAGUCUUA NC_006381_A_5153_5221_m AAGGCUUUAGCUU.AAUUAAAGUGUCUGGGUUGCAUUCAGAAGAUGUGGGAUAaa..guCCUGCAAGUCUUA NC_012707_A_5195_5263_m AAGGCUUUAUCUU.AAUUAAAGUAUCUGAGUUGCAUUCAGAAGAUGUGGGCUAaa..guCCUGCAAGUCUUA NC_005145_A_5186_5254_m AAGGCUUUGGCUU.AAUUAAAGCGUCUGAGUUGCAUUCAGAAGAUGUGGGAUAga..guCCUGCAAGUCUUA NC_012705_A_5215_5283_m AAGGCCUUAGCUU.AAUUAAAGUGUCUGAGUUGCAUUUAGAAGAUGUGGGAUAaa..guCCUGCAGGUCUUA NC_012717_A_5214_5282_m AAGGCCUUAGCUU.AAUUAAAGUGUCUGAGUUGCAUUUAGAAGAUGUGGGAUAaa..guCCUGCAGGUCUUA NC_012710_A_5194_5262_m AAGGCUUUAGCUU.AAUUAAAGUGUCUGAGUUGCAUUUAGAAGAUGUGGGCUAaa..guCCUGCAAGUCUUA NC_012711_A_5194_5262_m AAGGCUUUAGCUU.AAUUAAAGUGUCUGAGUUGCAUUUAGAAGAUGUGGGCUAaa..guCCUGCAAGUCUUA NC_012712_A_5194_5262_m AAGGCUUUAGCUU.AAUUAAAGUGUCUGAGUUGCAUUUAGAAGAUGUGGGCUAaa..guCCUGCAAGUCUUA NC_012713_A_5197_5265_m AAGGCUUUAGCUU.AAUUAAAGUGUCUGAGUUGCAUUUAGAAGAUGUGGGCUAaa..guCCCGCAAGUCUUA NC_012714_A_5212_5280_m AAGGCUUUGGCUU.AAUUAAAGUGUCUGAGUUGCAUUCAGAAGAUGUGGGCUAaa..guCCUGCAAGUCUUA NC_012715_A_5206_5274_m AAGGCUUUAGCUU.AAUUAAAGUGUCUGAGUUGCAUUCAGAGGAUGCGGGAUAga..guCUCGCAAGUCUUA NC_010570_A_5156_5224_m GAGGCCUUAGCUU.AGUUAAAGUAUUUGAGUUGCAUUCAGAGGAUGUGGGUUAaa..auCUCACAGGCUUUA NC_003095_A_5179_5247_m AAGGUCUUAGCUU.AAUUAAAGUAUUUGAGUUGCAUUCAAAUGAUGUAAGAUAga..guCUUGCAGAUCUUA NC_007012_A_6156_6224_m AAGGCCUUAGCUU.AAUUAAAGUGUCUGAGUUGCAUUCAGGGGAUGUGGGGUAga..auCCUGCAGGUCUUA NC_003096_A_5148_5216_m AAGGCUUUAGCUU.AAUUAAAGUGUCUGAGUUGCAUUUAGAGGAUGUGGGAUAaa..auCCUGCAAGUCUUA NC_005251_A_5144_5212_m AGGGUUUUAGCUU.AAUUAAAGUGUUUGAGUUGCAUUCAUGAGAUGUUGGAUAga..guCCUGCAAGCCCUA NC_001778_A_5100_5168_m AGGGUUUUAGCUU.AAUUAAAGUGUUUGAGUUGCAUUCAUAAGAUGUGGGAUAaa..guCCUGCAAAUCCUA NC_004418_A_5100_5168_m AGGGUUUUAGCUU.AAUUAAAGUGUUUGAGUUGCAUUCAUAAGAUGUGGGAUAaa..guCCCGCAAAUCCUA #=GC SS_cons (((((((,,<<<<._____>>>>,<<<<<_______>>>>>,,,,<<<<<___......>>>>>))))))): #=GC RF gguauuaUAgUUu.AauuAaAAcAuuugaUUUGCAuucaaaAGaUGggaguuu......cuccCuaauaccA #=GC SN 0000000..1111......1111.22222.......22222....33333.........333330000000. #=GF CS 72 columns, 21 paired, 21 covariant; 4 stems //