exonfile for TnDa.fa > 2540 4385 evx2 +++ --- 2540 evx2_AF224263.fa ~~~~~~ evx2_AF224263.fa 424 223 424 3157 2540 79.23 8.8e-76 272.30 evx2_XM221512.fa 343 234 296 3157 2969 87.30 7.2e-33 129.40 +++ --- ~~~~~~ evx2_XM221512.fa 343 188 236 3586 3440 100.00 3.6e-24 100.50 evx2_AF224263.fa 424 177 225 3586 3440 97.96 1.3e-23 98.98 hoxD3_AH005407.fa 417 151 225 3664 3440 41.33 3.3e-11 57.77 +++ --- ~~~~~~ FRUP00000127657.fa 185 18 128 4385 4053 92.79 4.3e-57 208.80 evx2_AF224263.fa 424 26 138 4364 4050 57.52 2.2e-26 108.20 evx2_XM221512.fa 343 18 140 4385 4047 54.47 3.8e-26 107.10 > 10075 11083 hoxD12 +++ 10075 FRUP00000127656.fa --- ~~~~~~ FRUP00000127656.fa 261 1 183 10075 10632 79.57 3.7e-79 282.70 hoxD12_AF224263.fa 272 1 113 10075 10425 43.70 1.5e-19 84.73 hoxD12_NM_021193.fa 279 1 94 10075 10386 40.38 9.0e-15 68.94 +++ 10913 hoxD3_NW_042732.fa --- 11083 hoxD12_AF224263.fa ~~~~~~ hoxD12_AF224263.fa 272 188 272 10829 11083 72.94 4.9e-34 132.90 FRUP00000127656.fa 261 178 261 10832 11083 88.10 6.8e-33 129.00 hoxD12_NM_021193.fa 279 210 279 10874 11083 80.00 2.9e-29 117.10 hoxD11_AF224263.fa 265 188 251 10862 11053 59.38 1.3e-18 81.65 hoxD11_NM_008273.fa 336 263 322 10874 11053 61.67 3.7e-18 80.49 hoxD11_NM_021192.fa 338 265 324 10874 11053 61.67 3.8e-18 80.49 hoxD10_NW_042732.fa 338 240 328 10802 11074 46.15 4.2e-17 77.03 hoxD10_NM_002148.fa 340 243 330 10805 11074 45.56 5.5e-17 76.64 hoxD13_NW_042732.fa 204 106 196 10799 11056 45.05 8.5e-17 75.10 FRUP00000131837.fa 336 252 326 10844 11074 50.65 1.2e-16 75.48 hoxD13_NM_008275.fa 339 241 331 10799 11056 45.05 1.6e-16 75.10 hoxD10_NM_013554.fa 340 243 330 10805 11074 44.44 1.6e-16 75.10 FRUP00000131834.fa 273 195 262 10844 11050 53.62 2.1e-16 74.33 hoxD10_AF224263.fa 336 252 320 10844 11053 51.43 2.1e-16 74.71 hoxD13_NM_000523.fa 335 269 327 10880 11056 57.63 2.7e-16 74.33 hoxD9_NM_014213.fa 342 265 327 10844 11035 53.12 1.1e-14 68.94 hoxD9_NM013555.fa 339 262 324 10844 11035 53.12 1.1e-14 68.94 hoxD9_AF224263.fa 265 188 250 10844 11035 51.56 3.2e-14 67.01 hoxD13_AF224263.fa 284 218 269 10880 11035 55.77 3.0e-13 63.93 hoxD3_NM_006898.fa 432 180 251 10817 11050 41.03 4.8e-13 63.93 hoxD1_NW_042732.fa 401 297 359 10847 11050 48.53 5.8e-13 63.54 hoxD13_X87752.fa 256 192 248 10880 11050 50.88 5.8e-13 62.77 hoxD1_AF241528.fa 328 224 286 10847 11050 48.53 6.0e-13 63.16 hoxD3_AH005407.fa 417 162 236 10793 11050 39.53 6.1e-13 63.54 hoxD4_NM_010469.fa 250 153 209 10880 11050 47.37 7.4e-13 62.39 hoxD4_NW_042732.fa 249 151 207 10880 11050 47.37 7.4e-13 62.39 hoxD4_NM_014621.fa 255 155 211 10880 11050 47.37 7.5e-13 62.39 hoxD1_NM_010467.fa 327 232 285 10889 11050 53.70 7.8e-13 62.77 hoxD4a_AY168642.fa 236 147 203 10880 11050 47.37 9.0e-13 62.00 hoxD8_AF224263.fa 240 154 204 10898 11050 56.86 9.2e-13 62.00 hoxD8_NM_019558.fa 290 204 254 10898 11050 56.86 1.5e-12 61.62 FRUP00000131831.fa 393 160 217 10877 11050 46.55 1.7e-12 62.00 FRUP00000131832.fa 211 124 177 10880 11041 48.15 3.9e-12 59.69 hoxD5_AF224263.fa 252 173 234 10865 11050 43.55 4.8e-12 59.69 evx2_XM221512.fa 343 189 250 10874 11059 41.94 1.2e-11 58.92 evx2_AF224263.fa 424 178 239 10874 11059 40.32 4.4e-11 57.38 hoxD3_NW_042732.fa 92 1 46 10913 11050 50.00 4.9e-11 54.30 > 15252 20216 hoxD11 confusing! Intron in Exon2 - three fragments, OK +++ --- ~~~~~~ hoxD11_AF224263.fa 265 42 186 15252 15683 42.28 9.3e-30 118.60 +++ --- ~~~~~~ hoxD11_NM_008273.fa 336 258 302 16256 16390 86.67 1.3e-18 82.03 hoxD11_NM_021192.fa 338 263 304 16265 16390 90.48 1.7e-18 81.65 hoxD11_AF224263.fa 265 192 231 16271 16390 90.00 2.4e-17 77.41 +++ 20067 hoxDC11_Y14543-part.fa --- 20216 hoxD11_NM_008273.fa ~~~~~~ hoxD11_NM_008273.fa 336 258 336 19980 20216 93.67 1.2e-40 155.20 hoxD11_NM_021192.fa 338 263 338 19989 20216 96.05 1.6e-40 154.80 hoxD11_AF224263.fa 265 192 264 19995 20213 91.78 4.6e-37 142.90 hoxDC11_Y14543-part.fa 53 1 50 20067 20216 94.00 3.0e-25 100.50 hoxD10_AF224263.fa 336 263 335 20001 20216 63.01 2.7e-24 100.90 FRUP00000131837.fa 336 263 335 20001 20216 61.64 1.0e-23 98.98 hoxD10_NM_002148.fa 340 267 339 20001 20216 60.27 2.3e-23 97.83 hoxD10_NW_042732.fa 338 265 337 20001 20216 60.27 2.3e-23 97.83 hoxD10_NM_013554.fa 340 267 339 20001 20216 58.90 6.7e-23 96.29 FRUP00000131834.fa 273 205 267 19998 20186 61.90 2.6e-22 93.97 hoxD12_NM_021193.fa 279 208 269 19989 20174 64.52 3.2e-20 87.04 hoxD12_AF224263.fa 272 203 262 19995 20174 68.33 5.3e-20 86.27 hoxD9_AF224263.fa 265 198 250 19998 20156 64.15 2.5e-19 83.96 hoxD9_NM013555.fa 339 272 324 19998 20156 64.15 3.4e-19 83.96 hoxD9_NM_014213.fa 342 275 327 19998 20156 64.15 3.5e-19 83.96 hoxD13_NW_042732.fa 204 136 195 19995 20174 60.00 1.2e-18 81.26 hoxD13_NM_000523.fa 335 267 326 19995 20174 60.00 2.2e-18 81.26 hoxD13_NM_008275.fa 339 271 330 19995 20174 60.00 2.2e-18 81.26 hoxD13_X87752.fa 256 190 248 19995 20171 57.63 5.1e-17 76.26 hoxD13_AF224263.fa 284 216 269 19995 20156 61.11 1.1e-15 72.02 hoxD8_AF224263.fa 240 154 206 20019 20177 58.49 1.2e-15 71.63 hoxD1_NM_010467.fa 327 225 291 19980 20189 48.57 1.3e-15 72.02 hoxD4a_AY168642.fa 236 141 203 19977 20171 49.23 1.5e-15 71.25 FRUP00000131831.fa 393 155 217 19986 20171 52.38 1.6e-15 72.02 FRUP00000127656.fa 261 192 243 19995 20150 63.46 1.7e-15 71.25 hoxD3_AH005407.fa 417 175 236 19986 20171 50.00 2.2e-15 71.63 hoxD3_NM_006898.fa 432 190 251 19986 20171 50.00 2.3e-15 71.63 hoxD8_NM_019558.fa 290 204 256 20019 20177 58.49 2.5e-15 70.86 hoxD5_AF224263.fa 252 178 237 20001 20180 48.33 3.6e-15 70.09 hoxD1_AF241528.fa 328 233 292 20010 20189 51.67 3.8e-15 70.48 hoxD4_NM_010469.fa 250 153 209 20001 20171 50.88 4.6e-15 69.71 hoxD4_NW_042732.fa 249 151 207 20001 20171 50.88 4.6e-15 69.71 hoxD4_NM_014621.fa 255 155 211 20001 20171 50.88 4.7e-15 69.71 hoxD1_NW_042732.fa 401 306 365 20010 20189 51.67 6.2e-15 70.09 evx2_XM221512.fa 343 191 307 20001 20342 32.50 3.4e-14 67.40 FRUP00000131832.fa 211 124 180 20001 20171 49.12 4.1e-14 66.24 hoxD3_NW_042732.fa 92 3 46 20040 20171 59.09 1.0e-13 63.16 evx2_AF224263.fa 424 176 274 19989 20276 34.31 6.2e-13 63.54 > 23111 25147 hoxD10 +++ 23111 FRUP00000131837.fa --- ~~~~~~ FRUP00000131837.fa 336 1 245 23111 23836 73.06 1e-102 360.90 hoxD10_NM_002148.fa 340 1 248 23111 23836 49.80 5.1e-55 203.00 hoxD10_NM_013554.fa 340 1 248 23111 23836 49.40 6.6e-55 202.60 hoxD10_NW_042732.fa 338 1 225 23231 23893 46.05 2.4e-49 184.10 hoxD10_AF224263.fa 336 1 207 23111 23707 46.67 2.7e-45 170.60 +++ 24992 hoxDC11_Y14543-part.fa --- 25147 FRUP00000131837.fa ~~~~~~ FRUP00000131837.fa 336 246 336 24875 25147 97.80 7.0e-49 182.60 hoxD10_NM_002148.fa 340 252 340 24881 25147 92.13 2.8e-45 170.60 hoxD10_NW_042732.fa 338 250 338 24881 25147 92.13 2.8e-45 170.60 hoxD10_NM_013554.fa 340 252 340 24881 25147 91.01 8.1e-45 169.10 hoxD10_AF224263.fa 336 252 336 24893 25147 91.76 4.4e-43 163.30 FRUP00000131834.fa 273 193 271 24887 25123 68.35 3.3e-30 120.20 hoxD9_AF224263.fa 265 186 250 24887 25081 75.38 4.3e-27 109.80 hoxD9_NM_014213.fa 342 263 327 24887 25081 75.38 4.5e-27 110.20 hoxD9_NM013555.fa 339 260 324 24887 25081 75.38 4.5e-27 110.20 hoxD11_AF224263.fa 265 185 262 24899 25135 63.29 1.8e-25 104.40 hoxD11_NM_008273.fa 336 265 336 24926 25144 64.38 9.2e-25 102.40 hoxD11_NM_021192.fa 338 267 338 24926 25144 64.38 9.3e-25 102.40 hoxD5_AF224263.fa 252 172 234 24908 25096 60.32 1.8e-19 84.34 hoxD8_AF224263.fa 240 154 210 24944 25114 64.91 6.5e-19 82.42 hoxD8_NM_019558.fa 290 204 260 24944 25114 64.91 1.4e-18 81.65 hoxD12_NM_021193.fa 279 212 269 24926 25099 62.07 5.1e-18 79.72 hoxD4_NW_042732.fa 249 146 207 24911 25096 58.06 9.9e-18 78.57 hoxD4_NM_014621.fa 255 150 211 24911 25096 58.06 1.0e-17 78.57 hoxD4_NM_010469.fa 250 148 209 24911 25096 58.06 1.0e-17 78.57 hoxD4a_AY168642.fa 236 142 203 24911 25096 56.45 1.2e-17 78.18 hoxD12_AF224263.fa 272 200 262 24911 25099 57.14 1.4e-17 78.18 hoxD3_NM_006898.fa 432 160 251 24854 25096 43.48 3.2e-17 77.80 FRUP00000131831.fa 393 159 217 24920 25096 61.02 3.8e-17 77.41 FRUP00000131832.fa 211 119 180 24911 25096 56.45 5.2e-17 75.87 hoxD3_AH005407.fa 417 145 236 24854 25096 42.39 6.9e-17 76.64 hoxD1_NM_010467.fa 327 232 310 24935 25180 50.00 1.5e-16 75.10 hoxD13_NW_042732.fa 204 135 195 24917 25099 54.10 2.5e-16 73.56 hoxD13_NM_000523.fa 335 266 326 24917 25099 54.10 4.6e-16 73.56 hoxD13_NM_008275.fa 339 270 330 24917 25099 54.10 4.6e-16 73.56 hoxD1_AF241528.fa 328 233 290 24935 25108 60.34 9.9e-16 72.40 hoxD13_AF224263.fa 284 215 269 24917 25081 58.18 1.4e-15 71.63 hoxD1_NW_042732.fa 401 306 363 24935 25108 60.34 1.6e-15 72.02 hoxD13_X87752.fa 256 191 248 24923 25096 56.90 2.1e-15 70.86 hoxD3_NW_042732.fa 92 2 46 24962 25096 68.89 2.5e-15 68.55 hoxDC11_Y14543-part.fa 53 1 51 24992 25147 57.69 1.4e-14 65.08 FRUP00000127656.fa 261 194 243 24926 25075 58.00 1.2e-13 65.08 evx2_XM221512.fa 343 191 289 24926 25216 36.00 1.1e-12 62.39 evx2_AF224263.fa 424 180 278 24926 25216 36.00 3.1e-12 61.23 hoxD8_NW_042732.fa 194 64 113 24914 25063 54.00 5.9e-12 58.92 > 27965 29134 hoxD9 +++ 27965 FRUP00000131834.fa --- ~~~~~~ FRUP00000131834.fa 273 1 84 27965 28216 78.57 3.4e-73 131.30 hoxD9_AF224263.fa 265 1 87 27986 28228 48.28 4.2e-34 71.63 +++ --- ~~~~~~ FRUP00000131834.fa 273 92 193 28236 28538 73.53 3.4e-73 153.70 hoxD9_AF224263.fa 265 84 186 28233 28538 47.17 4.2e-34 82.42 +++ 28997 hoxDC11_Y14543-part.fa --- 29134 FRUP00000131834.fa ~~~~~~ FRUP00000131834.fa 273 193 273 28892 29134 90.12 6.7e-39 149.10 hoxD9_NM013555.fa 339 260 324 28892 29086 89.23 1.9e-30 121.30 hoxD9_NM_014213.fa 342 263 327 28892 29086 89.23 2.0e-30 121.30 hoxD9_AF224263.fa 265 186 250 28892 29086 86.15 2.1e-29 117.50 hoxD10_AF224263.fa 336 249 328 28889 29128 63.75 1.5e-27 111.70 FRUP00000131837.fa 336 250 328 28892 29128 65.82 1.5e-27 111.70 hoxD10_NW_042732.fa 338 252 330 28892 29128 63.29 4.4e-27 110.20 hoxD10_NM_002148.fa 340 254 332 28892 29128 63.29 4.5e-27 110.20 hoxD10_NM_013554.fa 340 254 332 28892 29128 62.03 1.3e-26 108.60 hoxD11_NM_021192.fa 338 257 328 28901 29116 54.17 9.6e-22 92.43 hoxD11_NM_008273.fa 336 264 326 28928 29116 61.90 2.1e-21 91.28 hoxD11_AF224263.fa 265 194 255 28931 29116 61.29 7.9e-21 88.97 hoxD5_AF224263.fa 252 178 242 28931 29125 64.62 1.4e-19 84.73 hoxD8_NM_019558.fa 290 207 258 28958 29113 75.00 1.8e-18 81.26 hoxD8_AF224263.fa 240 157 208 28958 29113 75.00 1.9e-18 80.88 hoxD4a_AY168642.fa 236 147 203 28931 29101 63.16 5.1e-16 72.79 hoxD4_NW_042732.fa 249 151 207 28931 29101 61.40 5.4e-16 72.79 FRUP00000131831.fa 393 159 217 28925 29101 59.32 5.5e-16 73.56 hoxD4_NM_010469.fa 250 153 209 28931 29101 61.40 5.5e-16 72.79 hoxD4_NM_014621.fa 255 155 211 28931 29101 61.40 5.6e-16 72.79 hoxD3_NW_042732.fa 92 2 46 28967 29101 71.11 1.1e-15 69.71 hoxD3_AH005407.fa 417 178 236 28925 29101 57.63 1.3e-15 72.40 hoxD3_NM_006898.fa 432 193 251 28925 29101 57.63 1.4e-15 72.40 hoxD1_NM_010467.fa 327 239 289 28961 29113 66.67 4.9e-15 70.09 hoxD1_NW_042732.fa 401 313 363 28961 29113 66.67 6.2e-15 70.09 hoxD1_AF241528.fa 328 240 290 28961 29113 66.67 6.4e-15 69.71 FRUP00000131832.fa 211 124 180 28931 29101 57.89 1.1e-14 68.17 hoxD13_NW_042732.fa 204 113 195 28853 29104 41.67 3.9e-14 66.24 hoxD13_NM_000523.fa 335 244 326 28853 29104 41.67 7.3e-14 66.24 hoxD13_NM_008275.fa 339 248 330 28853 29104 41.67 7.4e-14 66.24 hoxD12_NM_021193.fa 279 212 269 28931 29104 53.45 7.6e-14 65.85 hoxDC11_Y14543-part.fa 53 1 40 28997 29116 65.00 9.1e-14 62.39 hoxD12_AF224263.fa 272 204 262 28928 29104 52.54 1.3e-13 65.08 hoxD13_X87752.fa 256 182 248 28901 29101 44.78 2.9e-12 60.46 hoxD13_AF224263.fa 284 215 269 28922 29086 49.09 1.2e-11 58.54 FRUP00000127656.fa 261 187 243 28910 29080 49.12 3.3e-11 57.00 hoxD8_NW_042732.fa 194 49 113 28862 29068 46.38 3.8e-11 56.22 > 41585 42653 hoxD4 +++ 41585 hoxD4a_AY168642.fa --- ~~~~~~ FRUP00000131832.fa 211 23 137 41718 42065 67.52 5.5e-43 162.20 hoxD4a_AY168642.fa 236 17 136 41634 41996 57.02 1.3e-35 137.90 hoxD4a_AY168642.fa 236 1 45 41585 41719 91.11 8.1e-22 92.05 hoxD4_NW_042732.fa 249 1 44 41591 41719 75.00 4.8e-27 71.63 hoxD4_NW_042732.fa 249 47 164 41727 42065 35.59 4.8e-27 58.54 hoxD4_NM_010469.fa 250 1 49 41585 41728 73.47 1.1e-16 75.10 hoxD4_NM_014621.fa 255 1 31 41585 41677 80.65 1.4e-11 58.15 +++ --- 42653 FRUP00000131832.fa ~~~~~~ FRUP00000131832.fa 211 111 157 42350 42490 95.74 2.6e-47 93.20 FRUP00000131832.fa 211 159 211 42495 42653 92.45 2.6e-47 104.80 hoxD4a_AY168642.fa 236 134 180 42350 42490 91.49 1.5e-39 88.97 hoxD4a_AY168642.fa 236 179 236 42486 42653 74.14 1.5e-39 83.19 hoxD4_NW_042732.fa 249 141 184 42359 42490 95.45 4.6e-39 88.97 hoxD4_NW_042732.fa 249 186 249 42495 42653 67.19 4.6e-39 81.65 hoxD4_NM_010469.fa 250 143 186 42359 42490 95.45 1.0e-38 88.97 hoxD4_NM_010469.fa 250 188 250 42495 42653 66.67 1.0e-38 80.49 hoxD4_NM_014621.fa 255 145 188 42359 42490 95.45 2.3e-38 88.97 hoxD4_NM_014621.fa 255 190 255 42495 42653 63.64 2.3e-38 79.34 hoxD5_AF224263.fa 252 173 211 42374 42490 82.05 7.2e-25 67.40 hoxD5_AF224263.fa 252 213 238 42495 42572 88.46 7.2e-25 55.45 FRUP00000131831.fa 393 157 196 42377 42496 65.00 5.3e-11 57.00 hoxD3_AH005407.fa 417 176 215 42377 42496 65.00 7.4e-11 56.61 hoxD3_NM_006898.fa 432 191 230 42377 42496 65.00 7.7e-11 56.61 > 50558 51840 hoxD3 +++ 50558 FRUP00000131831.fa --- ~~~~~~ FRUP00000131831.fa 393 1 146 50558 50995 91.10 1e-158 231.50 hoxD3_NM_006898.fa 432 17 181 50558 50995 40.36 1e-137 98.98 hoxD3_AH005407.fa 417 1 168 50558 51001 40.24 3e-135 89.74 +++ 51174 hoxD3_NW_042732.fa --- 51440 hoxD3_NW_042732.fa ~~~~~~ FRUP00000131831.fa 393 146 333 51096 51659 87.77 1e-158 339.30 hoxD3_NM_006898.fa 432 179 343 51093 51578 77.58 1e-137 263.50 hoxD3_AH005407.fa 417 164 328 51093 51578 78.18 3e-135 264.60 hoxD13_Y13948-part.fa 167 1 105 51222 51530 86.67 9.0e-51 187.60 hoxD3_NW_042732.fa 92 1 92 51174 51440 80.43 1.0e-40 152.90 hoxD5_AF224263.fa 252 174 247 51129 51350 67.57 1.1e-24 101.70 hoxD4a_AY168642.fa 236 143 206 51129 51320 73.44 2.3e-24 100.50 hoxD4_NM_010469.fa 250 149 212 51129 51320 71.88 4.6e-23 96.29 hoxD4_NW_042732.fa 249 147 210 51129 51320 71.88 4.6e-23 96.29 hoxD4_NM_014621.fa 255 151 214 51129 51320 71.88 4.7e-23 96.29 FRUP00000131832.fa 211 120 195 51129 51380 58.33 5.4e-22 92.43 hoxD1_AF241528.fa 328 229 308 51138 51383 53.66 6.6e-20 86.27 hoxD1_NM_010467.fa 327 226 324 51120 51416 48.08 1.9e-19 84.73 hoxD1_NW_042732.fa 401 302 398 51138 51416 45.36 3.2e-19 84.34 FRUP00000131834.fa 273 204 267 51135 51326 57.81 2.9e-18 80.49 FRUP00000131837.fa 336 261 319 51135 51311 61.02 3.2e-17 77.41 hoxD10_AF224263.fa 336 261 319 51135 51311 61.02 3.2e-17 77.41 hoxD10_NM_002148.fa 340 265 323 51135 51311 61.02 3.2e-17 77.41 hoxD10_NW_042732.fa 338 263 321 51135 51311 61.02 3.2e-17 77.41 hoxD10_NM_013554.fa 340 265 323 51135 51311 61.02 5.5e-17 76.64 hoxD8_AF224263.fa 240 154 205 51159 51314 65.38 1.0e-16 75.10 hoxD9_AF224263.fa 265 197 250 51135 51296 64.81 1.5e-16 74.71 hoxD9_NM_014213.fa 342 274 327 51135 51296 64.81 2.1e-16 74.71 hoxD9_NM013555.fa 339 271 324 51135 51296 64.81 2.1e-16 74.71 hoxD8_NM_019558.fa 290 204 255 51159 51314 65.38 2.2e-16 74.33 hoxD11_NM_021192.fa 338 266 323 51138 51311 55.17 4.6e-16 73.56 hoxD11_NM_008273.fa 336 264 321 51138 51311 55.17 4.6e-16 73.56 evx2_XM221512.fa 343 191 256 51141 51338 51.52 8.0e-16 72.79 hoxD11_AF224263.fa 265 194 250 51141 51311 54.39 1.0e-15 72.02 evx2_AF224263.fa 424 180 245 51141 51338 51.52 2.3e-15 71.63 hoxD12_NM_021193.fa 279 208 268 51126 51311 51.61 1.2e-14 68.55 hoxD12_AF224263.fa 272 199 261 51123 51311 49.21 2.5e-14 67.40 hoxD13_NW_042732.fa 204 138 194 51141 51311 45.61 8.2e-12 58.54 hoxD13_X87752.fa 256 192 248 51141 51311 45.61 8.4e-12 58.92 hoxD13_NM_000523.fa 335 269 325 51141 51311 45.61 1.5e-11 58.54 hoxD13_NM_008275.fa 339 273 329 51141 51311 45.61 1.5e-11 58.54 hoxD13_AF224263.fa 284 218 269 51141 51296 46.15 3.6e-11 57.00 +++ --- 51840 hoxD3_NM_006898.fa ~~~~~~ hoxD3_NM_006898.fa 432 346 432 51583 51840 83.91 1e-137 160.20 hoxD3_AH005407.fa 417 331 417 51583 51840 83.91 3e-135 160.20 FRUP00000131831.fa 393 307 393 51580 51840 97.70 5.8e-50 186.40 > 133237 133238 3end