exonfile for TnBb.fa > 15031 15291 hoxB6b not complete! +++ --- ~~~~~~ hoxB6a_AL645782.fa 228 11 92 15031 15291 57.47 2.2e-23 97.06 hoxB6b_AL645798.fa 224 11 92 15031 15291 59.09 2.4e-22 93.59 hoxB6_AF287967.fa 224 11 90 15031 15291 45.98 4.1e-14 66.24 hoxB6_NM_008269.fa 224 11 90 15031 15291 45.98 2.6e-13 63.54 hoxB6_NW_042671.fa 295 11 90 15031 15291 45.98 3.7e-13 63.54 > 17948 19199 hoxB5b +++ 17948 hoxB5b_AL645798.fa --- ~~~~~~ hoxB5a_AL645782.fa 274 1 192 17951 18541 46.04 3.2e-40 153.30 hoxB5b_AL645798.fa 276 1 194 17948 18541 42.65 2.9e-36 140.20 hoxB5_NM_008268.fa 269 1 187 17948 18541 39.44 1.9e-24 100.90 hoxB5_NW_042671.fa 269 1 187 17948 18541 39.44 1.9e-24 100.90 hoxB5_AF287967.fa 269 1 87 17948 18196 66.67 1.0e-22 95.13 +++ 18975 FRUP00000138803.fa --- 19199 hoxB5b_AL645798.fa ~~~~~~ hoxB5b_AL645798.fa 276 195 276 18954 19199 95.12 2.4e-43 163.70 hoxB5a_AL645782.fa 274 193 272 18954 19193 96.25 1.2e-42 161.40 hoxB5_AF287967.fa 269 188 267 18954 19193 96.25 1.2e-42 161.40 hoxB5_NM_008268.fa 269 188 267 18954 19193 96.25 1.2e-42 161.40 hoxB5_NW_042671.fa 269 188 267 18954 19193 96.25 1.2e-42 161.40 hoxB7_NM_010460.fa 217 127 197 18942 19154 78.87 4.6e-31 122.50 hoxB4_prot.fa 251 159 234 18960 19187 73.68 9.4e-31 121.70 hoxB7a_AL645782.fa 227 135 205 18942 19154 78.87 1.8e-30 120.60 hoxB6b_AL645798.fa 224 142 223 18957 19190 70.73 2.4e-30 120.20 hoxB4_AF287967.fa 251 159 228 18963 19172 78.57 3.6e-30 119.80 hoxB4_NM_010459.fa 250 158 227 18963 19172 78.57 3.6e-30 119.80 hoxB4_NW_042671.fa 251 159 228 18963 19172 78.57 3.6e-30 119.80 hoxB7_NM_004502.fa 217 127 197 18942 19154 77.46 3.9e-30 119.40 hoxB4a_AL645782.fa 244 145 215 18960 19172 76.06 7.7e-30 118.60 hoxB7_NW_042671.fa 228 127 191 18942 19136 76.92 3.6e-26 106.30 hoxB6a_AL645782.fa 228 163 219 19011 19181 84.21 3.1e-25 103.20 hoxB8b_AL645798.fa 247 146 204 18975 19151 72.88 1.4e-23 97.83 hoxB3_NW_042671.fa 402 161 224 18975 19166 73.44 3.3e-23 97.44 hoxB3_AF287967.fa 431 189 252 18975 19166 73.44 3.6e-23 97.44 hoxB3_NM_010458.fa 433 192 255 18975 19166 73.44 3.6e-23 97.44 hoxB8_NM_024016.fa 243 153 205 18993 19151 79.25 1.5e-22 94.36 hoxB8_NM_010461.fa 243 153 205 18993 19151 79.25 1.5e-22 94.36 hoxB8_NW_042671.fa 243 153 205 18993 19151 79.25 1.5e-22 94.36 hoxB8a_AL645782.fa 245 152 204 18993 19151 79.25 1.6e-22 94.36 hoxB6_AF287967.fa 224 159 201 19011 19139 93.02 4.5e-21 89.35 hoxB6_NM_008269.fa 224 159 201 19011 19139 93.02 4.5e-21 89.35 hoxB6_NW_042671.fa 295 230 272 19011 19139 93.02 6.3e-21 89.35 FRUP00000138803.fa 57 1 57 18975 19145 71.93 3.5e-20 83.57 hoxB2_NW_042671.fa 324 112 171 18975 19154 65.00 3.0e-19 83.96 hoxB2a_AL645782.fa 390 159 215 18975 19145 68.42 4.8e-19 83.57 hoxB1b_AL645798.fa 307 212 284 18984 19184 54.79 1.5e-17 78.18 hoxB1a_AL645782.fa 311 221 277 18984 19154 64.91 5.9e-17 76.26 hoxB1_NM_008266.fa 297 203 256 18984 19145 66.67 9.5e-17 75.48 hoxB1_NW_042671.fa 297 203 256 18984 19145 66.67 9.5e-17 75.48 hoxB1_prot.fa 391 281 343 18957 19145 57.14 1.7e-16 75.10 hoxB9_AY014295.fa 250 186 234 18975 19121 69.39 1.1e-15 71.63 hoxB9_NW_042671.fa 250 186 234 18975 19121 69.39 1.1e-15 71.63 hoxB9a_AF071256.fa 255 191 239 18975 19121 67.35 2.5e-15 70.48 hoxB1_NM_002144.fa 301 207 253 18984 19124 65.96 3.4e-14 67.01 hoxB13_NW_042671.fa 243 175 232 18972 19145 48.28 3.2e-12 60.08 hoxB13_U81599.fa 284 216 273 18972 19145 48.28 3.9e-12 60.08 hoxB13_NM_008267.fa 286 218 275 18972 19145 48.28 3.9e-12 60.08 > 31300 31866 hoxB3b just homeodomain! +++ 31342 FRUP00000138803.fa --- 31866 hoxB3_NW_042671.fa ~~~~~~ hoxB3_NW_042671.fa 402 147 402 31300 31866 39.15 3.5e-33 130.60 hoxB3_NM_010458.fa 433 182 433 31312 31866 38.89 6.6e-33 129.80 hoxB3_AF287967.fa 431 179 252 31312 31533 82.43 5.5e-32 126.70 FRUP00000138803.fa 57 1 57 31342 31512 98.25 6.3e-30 115.90 hoxB2a_AL645782.fa 390 156 215 31333 31512 71.67 1.4e-23 98.60 hoxB2_NW_042671.fa 324 112 168 31342 31512 73.68 4.4e-23 96.67 hoxB4a_AL645782.fa 244 150 232 31342 31617 56.52 3.5e-22 93.20 hoxB1_prot.fa 391 270 359 31297 31560 56.67 3.6e-22 93.97 hoxB1_NW_042671.fa 297 185 294 31297 31593 47.27 9.8e-22 92.05 hoxB1_NM_008266.fa 297 185 294 31297 31593 47.27 1.3e-21 91.66 hoxB4_NW_042671.fa 251 147 222 31273 31521 59.04 2.3e-21 90.51 hoxB5_AF287967.fa 269 195 259 31342 31536 66.15 4.3e-21 89.74 hoxB5_NM_008268.fa 269 195 259 31342 31536 66.15 4.3e-21 89.74 hoxB5_NW_042671.fa 269 195 259 31342 31536 66.15 4.3e-21 89.74 hoxB5a_AL645782.fa 274 200 264 31342 31536 66.15 4.4e-21 89.74 hoxB5b_AL645798.fa 276 202 266 31342 31536 66.15 4.4e-21 89.74 hoxB1a_AL645782.fa 311 203 287 31297 31554 53.49 5.1e-21 89.74 hoxB4_NM_010459.fa 250 162 221 31342 31521 71.67 5.1e-21 89.35 hoxB4_prot.fa 251 164 223 31342 31521 71.67 5.2e-21 89.35 hoxB4_AF287967.fa 251 163 222 31342 31521 71.67 5.2e-21 89.35 hoxB7_NM_004502.fa 217 135 204 31333 31542 61.43 3.6e-20 86.27 hoxB1b_AL645798.fa 307 212 283 31351 31569 60.27 4.3e-20 86.66 hoxB7_NM_010460.fa 217 138 204 31342 31542 62.69 4.8e-20 85.89 hoxB6b_AL645798.fa 224 145 208 31333 31524 60.94 9.4e-19 81.65 hoxB7a_AL645782.fa 227 146 206 31342 31524 63.93 1.6e-18 80.88 hoxB7_NW_042671.fa 228 135 192 31333 31506 67.24 4.8e-18 79.34 hoxB8b_AL645798.fa 247 122 203 31246 31515 47.78 1.3e-16 74.71 hoxB6a_AL645782.fa 228 163 210 31378 31521 70.83 5.8e-16 72.40 hoxB1_NM_002144.fa 301 189 253 31297 31491 53.85 6.3e-16 72.79 hoxB8_NM_024016.fa 243 140 204 31321 31515 55.38 9.1e-15 68.55 hoxB8_NM_010461.fa 243 140 204 31321 31515 55.38 9.1e-15 68.55 hoxB8_NW_042671.fa 243 140 204 31321 31515 55.38 9.1e-15 68.55 hoxB8a_AL645782.fa 245 152 203 31360 31515 61.54 1.2e-14 68.17 hoxB6_AF287967.fa 224 159 200 31378 31503 73.81 3.1e-14 66.63 hoxB6_NM_008269.fa 224 159 200 31378 31503 73.81 3.1e-14 66.63 hoxB6_NW_042671.fa 295 230 271 31378 31503 73.81 4.4e-14 66.63 hoxB9_AY014295.fa 250 182 234 31330 31488 60.38 8.0e-14 65.47 hoxB9_NW_042671.fa 250 182 234 31330 31488 60.38 8.0e-14 65.47 hoxB9a_AF071256.fa 255 187 239 31330 31488 60.38 1.1e-13 65.08 hoxB13_U81599.fa 284 201 273 31303 31512 39.73 1.9e-11 57.77 hoxB13_NW_042671.fa 243 176 241 31342 31554 39.44 2.1e-11 57.38 hoxB13_NM_008267.fa 286 219 284 31342 31554 39.44 2.6e-11 57.38 > 32988 33928 hoxB1b +++ 32988 FRUP00000138806.fa --- 33542 FRUP00000138806.fa ~~~~~~ FRUP00000138806.fa 185 1 185 32988 33542 85.41 2e-100 352.80 hoxB1a_AL645782.fa 311 1 207 32991 33542 32.70 4.0e-53 95.52 hoxB1b_AL645798.fa 307 1 187 32991 33512 28.72 2.6e-17 77.41 +++ --- 33835 FRUP00000138803.fa ~~~~~~ hoxB1a_AL645782.fa 311 203 292 33611 33928 63.21 4.0e-53 122.50 hoxB1b_AL645798.fa 307 200 268 33638 33844 89.86 4.4e-33 129.80 hoxB1_prot.fa 391 277 346 33638 33844 84.29 7.1e-31 122.90 hoxB1_NW_042671.fa 297 192 293 33638 33925 62.50 6.3e-29 115.90 hoxB1_NM_008266.fa 297 192 293 33638 33925 61.54 1.8e-28 114.40 hoxB1_NM_002144.fa 301 201 253 33656 33814 83.02 6.9e-23 95.90 hoxB4a_AL645782.fa 244 147 226 33656 33895 55.00 6.5e-21 88.97 hoxB2_NW_042671.fa 324 114 200 33671 33910 57.47 3.5e-20 87.04 hoxB2a_AL645782.fa 390 139 216 33584 33838 57.65 5.7e-20 86.66 hoxB4_NW_042671.fa 251 143 223 33605 33847 54.32 7.5e-20 85.50 FRUP00000138803.fa 57 4 57 33674 33835 70.37 1.0e-19 82.03 hoxB4_prot.fa 251 161 224 33656 33847 62.50 1.7e-19 84.34 hoxB4_AF287967.fa 251 160 223 33656 33847 62.50 1.7e-19 84.34 hoxB4_NM_010459.fa 250 159 222 33656 33847 62.50 1.7e-19 84.34 hoxB3_NW_042671.fa 402 146 220 33617 33844 57.89 6.5e-19 83.19 hoxB5_AF287967.fa 269 198 255 33674 33847 67.24 9.0e-19 82.03 hoxB5_NM_008268.fa 269 198 255 33674 33847 67.24 9.0e-19 82.03 hoxB5_NW_042671.fa 269 198 255 33674 33847 67.24 9.0e-19 82.03 hoxB5a_AL645782.fa 274 203 260 33674 33847 67.24 9.2e-19 82.03 hoxB3_AF287967.fa 431 192 248 33674 33844 68.42 9.2e-19 82.80 hoxB3_NM_010458.fa 433 195 251 33674 33844 68.42 9.2e-19 82.80 hoxB5b_AL645798.fa 276 205 262 33674 33847 67.24 9.3e-19 82.03 hoxB7_NM_010460.fa 217 141 208 33674 33919 50.00 5.8e-18 78.95 hoxB7_NM_004502.fa 217 141 197 33674 33844 63.16 9.9e-18 78.18 hoxB6b_AL645798.fa 224 140 207 33626 33844 54.79 1.0e-17 78.18 hoxB7a_AL645782.fa 227 149 205 33674 33844 61.40 4.0e-17 76.26 hoxB6a_AL645782.fa 228 164 211 33704 33847 72.92 4.0e-17 76.26 hoxB7_NW_042671.fa 228 141 192 33674 33829 65.38 9.0e-17 75.10 hoxB8b_AL645798.fa 247 149 207 33674 33850 61.02 4.9e-16 72.79 hoxB8a_AL645782.fa 245 152 207 33683 33850 62.50 1.8e-15 70.86 hoxB8_NM_024016.fa 243 153 208 33683 33850 62.50 1.8e-15 70.86 hoxB8_NM_010461.fa 243 153 208 33683 33850 62.50 1.8e-15 70.86 hoxB8_NW_042671.fa 243 153 208 33683 33850 62.50 1.8e-15 70.86 hoxB6_AF287967.fa 224 160 200 33704 33826 73.17 8.2e-15 68.55 hoxB6_NM_008269.fa 224 160 200 33704 33826 73.17 8.2e-15 68.55 hoxB6_NW_042671.fa 295 231 271 33704 33826 73.17 1.2e-14 68.55 hoxB13_NW_042671.fa 243 179 232 33674 33835 46.30 7.2e-12 58.92 hoxB13_U81599.fa 284 220 273 33674 33835 46.30 8.7e-12 58.92 hoxB13_NM_008267.fa 286 222 275 33674 33835 46.30 8.8e-12 58.92 hoxB9_AY014295.fa 250 189 234 33674 33811 65.22 2.2e-11 57.38 hoxB9_NW_042671.fa 250 189 234 33674 33811 65.22 2.2e-11 57.38 hoxB9a_AF071256.fa 255 194 239 33674 33811 65.22 2.9e-11 57.00 > 56439 56440 3end