exonfile for FrAa.fa > 2938 5152 evx1 2938 4071 4793 5152 2938 3372 75.17 5.8e-60 [Rn] whole protein > 11576 12865 hoxa13a 11567 12256 genemodel 11576 12238 67.42 5.0e-86 [DrAb] 4AS overlap 12626 12823 84.85 8.1e-28 [DrAb] no hit for terminal 14AS 11624 12232 65.09 2.0e-69 [GgA] 12617 12865 86.75 9.8e-37 [GgA] 11576 12232 72.07 1.9e-91 [HfM] 12617 12865 83.13 9.4e-35 [HfM] 11576 11677 69.44 7.7e-11 [HsA] no match for ~130AS in between 11852 12232 60.00 3.0e-39 [HsA] 12617 12865 86.75 1.4e-36 [HsA] > 20875 22503 hoxa11a 20875 21525 56.95 5.5e-61 [DrAb] 4AS overlap 22258 22503 90.24 3.7e-41 [DrAb] 20875 21420 61.34 2.1e-60 [DrAa] not hit for ~50AS in between 22258 22503 85.37 3.4e-38 [DrAa] 20875 21405 60.99 2.0e-55 [HfM] not hit vor 42AS in between 22279 22503 96.00 1.2e-39 [HfM] 20878 21399 60.22 4.1e-52 [HsA] no hit for ~70AS in between 22270 22503 91.03 1.0e-39 [HsA] > 27585 29214 hoxa10a 27585 29117 hoxa10a old 28839 29117 evidence not experimental U92573 27810 27878 100.00 1.3e-12 [FrA] 3AS overlap 27871 27906 91.67 1.3e-12 [FrA] no hit for ~40AS in between 28845 29117 95.60 2.6e-48 [FrA] 27585 27863 53.76 1.6e-22 [DrAb] no hit for part in between 28845 29117 86.81 3.3e-44 {DrAb] (first and last position verified with [HsA]) > 33096 34247 hoxa9a 32999 34150 hoxa9a old 32999 34150 32999 33607 100.00 7e-112 [FrA] 33911 34150 100.00 4.3e-45 [FrA] 32999 33514 38.64 4.6e-24 [DrAa] no hit for 6AS in between 33902 34096 95.38 2.9e-34 [DrAa] no hit for terminal 17AS 32999 33556 38.50 5.9e-22 [DrAb] no hit for 3AS in between 33911 34147 88.61 5.9e-38 [DrAb] no hit for the terminal AS 32999 33553 38.17 2.7e-21 [DrAb] 4AS overlap 33902 34114 88.73 1.6e-34 [DrAb] (first and last position verified with [HsA]) !> 37366 38606 hoxa7a ! 37366 37655 ! 38486 38606 ! 37366 37404 84.62 5.5e-05 [HsA] some leftover of hoxA7 ! 37421 37549 34.09 5.5e-05 [HsA] some leftover of hoxA7 ! 38517 38570 61.11 3.1e-04 [HsA] some leftover of hoxA7 > 42920 44296 hoxa5a 42823 44199 hoxa5a old 42823 43395 79.80 3.0e-75 [MsA] 43951 44199 95.18 2.7e-44 [MsA] 42444 44199 hoxa5a genmodel 42444 42701 42706 43246 43951 44199 42940 43404 45.51 3.5e-23 [DrAa] 1AS overlap 43954 44199 92.68 2.2e-41 [DrAa] 42823 43404 45.05 1.3e-35 [HsA] 1AS overlap 43954 44199 91.46 6.0e-41 [HsA] > 49141 50417 hoxa4a 49044 50320 hoxa4a old 49044 49472 90.21 1.3e-79 [MsA] 4As overlap 49973 50320 86.21 3.2e-41 [MsA] 49044 50200 hoxa4a genmodel 49044 49523 49973 50200 49044 49451 68.38 1.3e-55 [DrAa] no hit for 3AS in between 49973 50320 68.97 5.3e-41 [DrAa] (first position verified with [HsA]) > 59828 62732 hoxa3a 59731 62635 hoxa3a old 59731 60192 61844 62635 (varified using [DrAa]) (first and last position verified with [HsA]) > 66634 68243 hoxa2a 66537 68146 hoxa2a old 66537 66902 67421 68146 (verified using [DrAb]) (first and last position verified with [HsA]) > 71371 72660 hoxa1a 71274 72563 hoxa1a old 71274 72563 71274 71879 53.88 9.9e-57 [DrAa] 1AS overlap 72231 72530 80.00 1.0e-40 [DrAa] (long) no match for terminal 20AS 72231 72530 80.00 8.7e-41 [DrAa] (short) no match for terminal 20AS > 117424 118122 SNex 117327 118025 SNex old 118025 117327 the first half of the hoxA6 protein [HsA] matches to hoxA4 the second half to hoxA5 and hoxA4 the second half of the hoxA7 protein[HsA] matches to hoxA5 and hoxA4